Changelog

Source: NEWS.md

fobitools 1.11.4

  • Fix bugs in vignettes

fobitools 1.1.9

  • Minor changes in package vignette titles.
  • Minor changes in parse_fobi() function.
  • Update all data files to FOBI 1.5 version.

fobitools 1.0.0

  • Released to Bioconductor 3.13.

fobitools 0.99.56

  • New package vignette “Use case ST000291”.
  • New package vignette “Use case ST000629”.
  • Remove AppVeyor and Travis CI and move codecov to GitHub Actions.
  • Updated vignette “Dietary text annotation”.
  • Improvements to the annotate_foods() function.

fobitools 0.99.41

  • Switch from the sigora CRAN package to the fgsea Bioconductor package to perform enrichment analysis.
  • Added new function named msea to perform GSEA using FOBI.

fobitools 0.99.38

  • Addressing Vince Carey (package reviewer from Bioconductor) comments and suggestions.

fobitools 0.99.35

  • Enabling the option to include a FOBI table instead of downloading it from GitHub.
  • Added FOBI table in package data.

fobitools 0.99.29

  • Fix Bioconductor Single Package Builder errors and warnings:

    • fobitools.Rproj file removed
    • Rd line widths set to less than 100 characters
    • Examples added in ora.R
    • R version dependency updated from 3.6.0 to 4.1.
    • Use TRUE/FALSE instead of T/F in ora.R

fobitools 0.99.24

  • Added vignettes.
  • pkgdown updated.
  • Submitted to Bioconductor!

fobitools 0.99.18

  • Added a function called fobi_graph to generate FOBI graphs.

fobitools 0.99.12

  • Added a NEWS.md file to track changes to the package.